BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034E10LP1|AL429919
(862 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig725 1179 0.0
>3x_Contig725
Length = 2758
Score = 1179 bits (589), Expect = 0.0
Identities = 621/639 (97%), Gaps = 1/639 (0%)
Strand = Plus / Minus
Query: 225 tcaaacttttatttttccgtttccattccccgtttcgtatcattacagacttgactattc 284
|||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2750 tcaatcttttatttttctttttccattccccgtttcgtatcattacagacttgactattc 2691
Query: 285 aactaagcycttcgcttcaactcgtcttattcttcctataaacctttttttttttctgta 344
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2690 aactaagctcttcgcttcaactcgtcttattcttcctataaacctttttttttttctgta 2631
Query: 345 gtaataattccmttcaaatatagactacgcycmagcmaatatctagaaaataaatattcg 404
||||||||||| |||||||||||||||||| | ||| |||||||||||||||||||||||
Sbjct: 2630 gtaataattccattcaaatatagactacgctcaagcaaatatctagaaaataaatattcg 2571
Query: 405 aatatacatcacagctttagtgccctttgtttaggcgattggaggaaggtgtacgcyttc 464
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2570 aatatacatcacagctttagtgccctttgtttaggcgattggaggaaggtgtacgctttc 2511
Query: 465 actattatctaactgatgtagaataaacattcyaaaaccmaagtctttttcgagttctaa 524
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 2510 actattatctaactgatgtagaataaacattctaaaaccaaagtctttttcgagttctaa 2451
Query: 525 attatgaaagtmagattatgcmtgacaataggaaaaagataatttcmagattcgaattgc 584
||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 2450 attatgaaagtaagattatgcatgacaataggaaaaagataatttcaagattcgaattgc 2391
Query: 585 agttagaacggcggcttcggaacagaaagaaggcaagcctaaaaactatacctcaaatca 644
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2390 agttagaacggcggcttcggaacagaaagaaggcaagcataaaaactatacctcaaatca 2331
Query: 645 tacgattcttgattcacttgatgcgattctcatgtcctattccttaagacactctgatta 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2330 tacgattcttgattcacttgatgcgattctcatgtcctattccttaagacactctgatta 2271
Query: 705 ttttatgactgtkaagtctcactgtttcagtctcttttccgttttgtcttctctacggcc 764
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2270 ttttatgactgtgaagtctcactgtttcagtctcttttccgttttgtcttctctacggcc 2211
Query: 765 ttttcagcaagtacgc-gtkagaaccgctaagcatacatcggaaatggaacttagcccat 823
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2210 ttttcagcaagtacgcagtgagaaccgctaagcatacatcggaaatggaacttagcccat 2151
Query: 824 ttttagtctcaactctcgatcgtagacgtaatcgcagtt 862
|||||||||||||||||||||||||||||||||||||||
Sbjct: 2150 ttttagtctcaactctcgatcgtagacgtaatcgcagtt 2112
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 18,116
Number of Sequences: 1807
Number of extensions: 18116
Number of successful extensions: 106
Number of sequences better than 1.0e-20: 1
length of query: 862
length of database: 10,358,551
effective HSP length: 16
effective length of query: 846
effective length of database: 10,329,639
effective search space: 8738874594
effective search space used: 8738874594
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)